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Test Code TBCPCR Mycobacterial PCR, UW

Infectious

Additional Codes

EPIC LAB4892
UW NTMDNA + TBCDNA

Purpose

While Mycobacterium tuberculosis complex members are the most commonly known human pathogens, Non-tuberculosis Mycobacteria (aslo known as environmental mycobacteria, atypical mycobacteria, and mycobacteria other than tuberculosis (MOTT)) are also implicated in tuberculosis-like disease, localized lymphadenitis, gastrointestinal disese, and disseminated infections. Acid fast bacilli can be very difficult to grow due to their nutritional requirements. Some specimens may never reveal the presence of a pathogen because of low abundance and/or lack of viability. The use of PCR to detect Mycobacterial DNA extracted directly from clinical specimens facilitates the identifcation pf these pathogens.

Methodology

DNA extraction, nucleic acid purification, polymerase chain reaction, sequencing.

Sample Type

  • Tissue
  • Fluid (non-blood)
  • Bronchoalveolar lavage (BAL)
  • Urine
  • Processed sputa
  • Gastrointestinal biopsies

Specimen Minimum Volume

1 mL

Specimen Stability

Freeze specimens in sterile container at -20°C.

Rejection Criteria

  • Tissues free-floating in formalin
  • Samples containing SPS, citrate, or heparin
  • Blood/Serum specimens
  • Samples collected on swabs

Performing Laboratory

University of Washington Laboratory

CPT Code

87551

87556

LOINC

14974-0 Mycobacterium sp DNA NAA+probe QI (Specimen)

38379-4 M TB Cmplx DNA Spec Ql NAA+probe